msm_we.nmm

Adapted from the original NMpathAnalysis package, https://github.com/ZuckermanLab/NMpathAnalysis

Classes

MarkovPlusColorModel(trajectories, stateA, ...)

Define a class for analyzing MD trajectories using Markovian Plus Color Model

NonMarkovModel(trajectories, stateA, stateB)

Define a class for analyzing MD trajectories using Markovian or non-Markovian Model